Korean "Hanwoo" bovine genome and whole SNPs announced
The Hanwoo is the third bovine genome to be finished in the world and it covers 92% of the reference genome sequence. The Korean scientists state that a comparison of the Hanwoo with the reference bovine genome stored in the NCBI database reveals key secrets about Hanwoo-specific development, diseases and evolution.
"The Hanwoo genome has 72% novel SNP candidates and 28% identical polymorphisms compared to NCBI’s dbSNP" said Dr. Jong-Joo Kim, professor at Yeungnam University.
This project has been a collaboration between Yeungnam University, Chungbuk National University, and Insilicogen. Next Generation Sequencing (NGS) technologies were used to sequence the genome. Assembly of the high-throughput sequencing data played an important role in ensuring that the analysis could be finished on schedule. The complete analysis software was provided by CLC bio, Aarhus, Denmark.
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