List of sequenced prokaryotic genomes
This list of sequenced eubacterial genomes contains all the eubacterial known to have publically available complete genome sequences that have been assembled, and placed in a public database on the WWW.
Additional recommended knowledge
Sequenced Bacterial Genomes
Species
| Strain
| Type
| Base Pairs
| Genes
| Reference
|
Acidobacteria bacterium
| Ellin345
| Acidobacteria
| 5,650,368
| 4,777
| Unpublished
|
Acinetobacter species
| ADP1
| Proteobacteria Gammaproteobacteria
| 3,598,621
| 3,325
| [1]
|
Agrobacterium tumefaciens
| C58
| Proteobacteria Alphaproteobacteria
| 2,841,581
| 2,722
| [2]
|
Anabaena nostoc
| PCC7120
| Cyanobacteria Nostocales
| 6,413,771
| 5,368
| [3]
|
Anabaena variabilis
| ATCC29413
| Cyanobacteria Nostocales
| 6,365,727
| 5,039
| Unpublished
|
Anaeromyxobacter dehalogenans
| 2CP-C
| Proteobacteria delta-epsilon
| 5,013,479
| 4,346
| Unpublished
|
Anaplasma marginale
| StMaries
| Proteobacteria Alphaproteobacteria
| 1,197,687
| 949
| [4]
|
Anaplasma phagocytophilum
| HZ
| Proteobacteria Alphaproteobacteria
| 1,471,282
| 1,264
| [5]
|
Aquifex aeolicus
| VF5
| Aquificae Aquificae
| 1,551,335
| 1,522
| [6]
|
Azoarcusspecies
| EbN1
| Proteobacteria Betaproteobacteria
| 4,296,230
| 4,128
| [7]
|
Bacillus anthracis
| Ames
| Firmicutes Bacilli
| 5,227,293
| 5,311
| [8]
|
Bacillus anthracis
| Sterne
| Firmicutes Bacilli
| 5,228,663
| 5,287
| Unpublished
|
Bacillus cereus
| ATCC10987
| Firmicutes Bacilli
| 5,224,283
| 5,603
| [9]
|
Bacillus cereus
| ATCC14579
| Firmicutes Bacilli
| 5,411,809
| 5,234
| [10]
|
Bacillus cereus
| ZK
| Firmicutes Bacilli
| 5,300,915
| 5,134
| Unpublished
|
Bacillus clausii
| KSMK16
| Firmicutes Bacilli
| 4,303,871
| 4,108
| [11]
|
Bacillus halodurans
| C125
| Firmicutes Bacilli
| 4,202,352
| 4,066
| [12]
|
Bacillus licheniformis
| ATCC14580
| Firmicutes Bacilli
| 4,222,334
| 4,152
| [13]
|
Bacillus licheniformis
| Unspecified
| Firmicutes Bacilli
| 4,222,645
| 4,196
| [14]
|
Bacillus licheniformis
| DSM13
| Firmicutes Bacilli
| 4,222,645
| 4,196
| [15]
|
Bacillus subtilis
| 168
| Firmicutes Bacilli
| 4,214,630
| 4,106
| [16]
|
Bacillus thuringiensis
| 9727
| Firmicutes Bacilli
| 5,237,682
| 5,117
| Unpublished
|
Bacteroides fragilis
| NCTC9343
| Bacteroidetes/Chlorobi Bacteroidetes
| 5,205,140
| 4,260
| [17]
|
Bacteroides fragilis
| YCH46
| Bacteroidetes/Chlorobi Bacteroidetes
| 5,277,274
| 4,578
| Unpublished
|
Bacteroides thetaiotaomicron
| VPI5482
| Bacteroidetes/Chlorobi Bacteroidetes
| 6,260,361
| 4,778
| [18]
|
Bartonella henselae
| Houston-1
| Proteobacteria Alphaproteobacteria
| 1,931,047
| 1,612
| [19]
|
Bartonella quintana
| Toulouse
| Proteobacteria Alphaproteobacteria
| 1,581,384
| 1,308
| [20]
|
Baumannia cicadellinicola
| Hc
| Proteobacteria Gammaproteobacteria
| 686,194
| 595
| Unpublished
|
Bdellovibrio bacteriovorus
| HD100
| Proteobacteria delta-epsilon
| 3,782,950
| 3,583
| [21]
|
Bifidobacterium longum
| NCC2705
| Acidobacteria
| 2,256,640
| 1,727
| [22]
|
Blochmannia floridanus
| Strain
| Proteobacteria Gammaproteobacteria
| 705,557
| 589
| [23]
|
Blochmannia pennsylvanicus
| bpEN
| Proteobacteria Gammaproteobacteria
| 791,654
| 610
| [24]
|
Bordetella bronchiseptica
| RB50
| Proteobacteria Betaproteobacteria
| 5,339,179
| 5,006
| Unpublished
|
Bordetella parapertussis
| 12822
| Proteobacteria Betaproteobacteria
| 4,773,551
| 4,402
| Unpublished
|
Bordetella pertussis
| TohamaI
| Proteobacteria Betaproteobacteria
| 4,086,189
| 3,806
| Unpublished
|
Borrelia burgdorferi
| B31
| Spirochaetes
| 910,724
| 850
| [25]
|
Borrelia garinii
| PBi
| Spirochaetes
| 904,246
| 832
| [26]
|
Bradyrhizobium japonicum
| USDA110
| Proteobacteria Alphaproteobacteria
| 9,105,828
| 8,317
| [27]
|
Brucella abortus
| 9-941
| Proteobacteria Alphaproteobacteria
| 2,124,241
| 2,030
| [28]
|
Unspecified
| Unspecified
| Proteobacteria Alphaproteobacteria
| 1,162,204
| 1,055
| [29]
|
Brucella melitensis
| 16M
| Proteobacteria Alphaproteobacteria
| 2,117,144
| 2,059
| [30]
|
Unspecified
| Unspecified
| Proteobacteria Alphaproteobacteria
| 1,177,787
| 1,139
| [31]
|
Brucella melitensis
| 2308
| Proteobacteria Alphaproteobacteria
| 1,156,948
| 1,164
| [32]
|
Brucella melitensis
| Abortus
| Proteobacteria Alphaproteobacteria
| 2,121,359
| 2,186
| [33]
|
Brucella Suis
| 1330
| Proteobacteria Alphaproteobacteria
| 2,107,794
| 2,123
| [34]
|
Unspecified
| Unspecified
| Proteobacteria Alphaproteobacteria
| 1,207,381
| 1,150
| [35]
|
Buchnera aphidicola
| APS
| Proteobacteria Gammaproteobacteria
| 640,681
| 564
| [36]
|
Buchnera aphidicola
| B
| Proteobacteria Gammaproteobacteria
| 615,980
| 504
| [37]
|
Buchnera aphidicola
| Sg
| Proteobacteria Gammaproteobacteria
| 641,454
| 545
| [38]
|
Burkholderia cenocepacia
| AU1054
| Proteobacteria Betaproteobacteria
| 3,294,563
| 2,965
| Unpublished
|
Unspecified
| Unspecified
| Proteobacteria Betaproteobacteria
| 2,788,459
| 2,472
| Unpublished
|
Unspecified
| Unspecified
| Proteobacteria Betaproteobacteria
| 1,196,094
| 1,040
| Unpublished
|
Burkholderia mallei
| ATCC23344
| Proteobacteria Betaproteobacteria
| 3,510,148
| 2,996
| Unpublished
|
Unspecified
| Unspecified
| Proteobacteria Betaproteobacteria
| 2,325,379
| 2,029
| [39]
|
Burkholderia pseudomallei
| 1710b
| Proteobacteria Betaproteobacteria
| 4,126,292
| 3,736
| Unpublished
|
Unspecified
| Unspecified
| Proteobacteria Betaproteobacteria
| 3,181,762
| 2,611
| Unpublished
|
Burkholderia pseudomallei
| K96243
| Proteobacteria Betaproteobacteria
| 4,074,542
| 3,460
| [40]
|
Unspecified
| Unspecified
| Proteobacteria Betaproteobacteria
| 3,173,005
| 2,395
| [41]
|
Burkholderia species
| 383
| Proteobacteria Betaproteobacteria
| 3,694,126
| 3,334
| Unpublished
|
Unspecified
| Unspecified
| Proteobacteria Betaproteobacteria
| 3,587,082
| 3,174
| Unpublished
|
Unspecified
| Unspecified
| Proteobacteria Betaproteobacteria
| 1,395,069
| 1,209
| Unpublished
|
Burkholderia thailandensis
| E264
| Proteobacteria Betaproteobacteria
| 3,809,201
| 3,276
| [42]
|
Unspecified
| Unspecified
| Proteobacteria Betaproteobacteria
| 2,914,771
| 2,358
| [43]
|
Burkholderia xenovorans
| LB400
| Proteobacteria Betaproteobacteria
| 4,895,836
| 4,430
| Unpublished
|
Unspecified
| Unspecified
| Proteobacteria Betaproteobacteria
| 3,363,523
| 2,960
| Unpublished
|
Unspecified
| Unspecified
| Proteobacteria Betaproteobacteria
| 1,471,779
| 1,312
| Unpublished
|
Campylobacter jejuni
| NCTC11168
| Proteobacteria delta-epsilon
| 1,641,481
| 1,643
| [44]
|
Campylobacter jejuni
| RM1221
| Proteobacteria delta-epsilon
| 1,777,831
| 1,838
| [45]
|
Carboxydothermus hydrogenoformans
| Z2901
| Firmicutes Clostridia
| 2,401,520
| 2,620
| Unpublished
|
Carsonellaruddii
| PV
| Proteobacteria Gammaproteobacteria
| 159,662
| 182
| [46]
|
Caulobactercresentus
| CB15
| Proteobacteria Alphaproteobacteria
| 4,016,947
| 3,737
| [47]
|
Chlamydia caviae
| GPIC
| Chlamydiae/Verrucomicrobia Chlamydiae
| 1,173,390
| 998
| [48]
|
Chlamydia muridarum
| Nigg
| Chlamydiae/Verrucomicrobia Chlamydiae
| 1,072,950
| 904
| [49]
|
Chlamydia trachomatis
| AHAR13
| Chlamydiae/Verrucomicrobia Chlamydiae
| 1,044,459
| 911
| [50]
|
Chlamydia trachomatis
| DUW
| Chlamydiae/Verrucomicrobia Chlamydiae
| 1,042,519
| 894
| [51]
|
Chlamydophila abortus
| S26-3
| Chlamydiae/Verrucomicrobia Chlamydiae
| 1,144,377
| 961
| [52]
|
Chlamydophila felis
| FeC56
| Chlamydiae/Verrucomicrobia Chlamydiae
| 1,166,239
| 1,005
| Unpublished
|
Chlamydophila pneumoniae
| AR39
| Chlamydiae/Verrucomicrobia Chlamydiae
| 1,229,853
| 1,110
| [53]
|
Chlamydophila pneumoniae
| CWL029
| Chlamydiae/Verrucomicrobia Chlamydiae
| 1,230,230
| 1,052
| [54]
|
Chlamydophila pneumoniae
| J138
| Chlamydiae/Verrucomicrobia Chlamydiae
| 1,226,565
| 1,069
| [55]
|
Chlamydophila pneumoniae
| TW183
| Chlamydiae/Verrucomicrobia Chlamydiae
| 1,225,935
| 1,113
| Unpublished
|
Chlorobium chlorochromatii
| CaD3
| Bacteroidetes/Chlorobi Chlorobi
| 2,572,079
| 2,002
| Unpublished
|
Chlorobium tepidum
| TLS
| Bacteroidetes/Chlorobi Chlorobi
| 2,154,946
| 2,255
| [56]
|
Chromobacterium violaceum
| ATCC12472
| Proteobacteria Betaproteobacteria
| 4,751,080
| 4,407
| [57]
|
Chromohalobacter salexigens
| DSM3043
| Proteobacteria Gammaproteobacteria
| 3,696,649
| 3,298
| Unpublished
|
Clostridium acetobutylicum
| ATCC824
| Firmicutes Clostridia
| 3,940,880
| 3,672
| [58]
|
Clostridium difficile
| QCD-32g58
| Firmicutes Clostridia
| 3,840,681
|
| Unpublished
|
Clostridium perfringens
| 13
| Firmicutes Clostridia
| 3,031,430
| 2,660
| [59]
|
Clostridium tetani
| E88
| Firmicutes Clostridia
| 2,799,251
| 2,373
| [60]
|
Colwellia psychrerythraea
| 34H
| Proteobacteria Gammaproteobacteria
| 5,373,180
| 4,910
| Unpublished
|
Corynebacterium diphtheriae
| NCTC13129
| Acidobacteria
| 2,488,635
| 2,320
| [61]
|
Corynebacterium efficiens
| YS314
| Acidobacteria
| 3,147,090
| 2,942
| [62]
|
Corynebacterium glutamicum
| ATCC13032
| Acidobacteria
| 3,309,401
| 3,099
| Unpublished
|
Unspecified
| Unspecified
| Acidobacteria
| 3,282,708
| 3,058
| [63]
|
Corynebacterium jeikeium
| K411
| Acidobacteria
| 2,462,499
| 2,104
| [64]
|
Coxiella burnetii
| RSA493
| Proteobacteria Gammaproteobacteria
| 1,995,281
| 2,016
| [65]
|
Cyanobacteria bacterium
| YellowstoneA
| Cyanobacteria Chroococcales
| 2,932,766
| 2,760
| [66]
|
Cyanobacteria bacterium
| YellowstoneB
| Cyanobacteria Chroococcales
| 3,046,682
| 2,862
| [67]
|
Cytophaga hutchinsonii
| ATCC33406
| Bacteroidetes/Chlorobi Chlorobi
| 4,433,218
|
| Unpublished
|
Dechloromonas aromatica
| RCB
| Proteobacteria Betaproteobacteria
| 4,501,104
| 4,171
| Unpublished
|
Dehalococcoides etheno
| 195
| Chloroflexi Dehalococcoidetes
| 1,469,720
| 1,580
| [68]
|
Dehalococcoides species
| CBDB1
| Chloroflexi Dehalococcoidetes
| 1,395,502
| 1,458
| [69]
|
Deinococcus geothermalis
| DSM11300
| Deinococcus-Thermus Deinococci
| 2,467,205
| 2,335
| Unpublished
|
Deinococcus radiodurans
| R1
| Deinococcus-Thermus Deinococci
| 2,648,638
| 2,579
| [70]
|
Unspecified
| Unspecified
| Deinococcus-Thermus Deinococci
| 412,348
| 357
| [71]
|
Desulfitobacterium hafniense
| Y51
| Firmicutes Clostridia
| 5,727,534
| 5,060
| [72]
|
Desulfotalea psychrophila
| LSv54
| Proteobacteria delta-epsilon
| 3,523,383
| 3,118
| Unpublished
|
Desulfovibrio desulfuricans
| G20
| Proteobacteria delta-epsilon
| 3,730,232
| 3,775
| Unpublished
|
Desulfovibrio vulgaris
| Hildenborough
| Proteobacteria delta-epsilon
| 3,570,858
| 3,379
| [73]
|
Ehrlichia canis
| Jake
| Proteobacteria Alphaproteobacteria
| 1,315,030
| 925
| Unpublished
|
Ehrlichia chaffeensis
| Arkansas
| Proteobacteria Alphaproteobacteria
| 1,176,248
| 1,105
| [74]
|
Ehrlichia ruminantium
| Gardel
| Proteobacteria Alphaproteobacteria
| 1,499,920
| 950
| Unpublished
|
Ehrlichia ruminantium
| Welgevonden
| Proteobacteria Alphaproteobacteria
| 1,512,977
| 958
| Unpublished
|
Unspecified
| Unspecified
| Proteobacteria Alphaproteobacteria
| 1,516,355
| 920
| [75]
|
Enterococcus faecalis
| V583
| Firmicutes Bacilli
| 3,218,031
| 3,113
| [76]
|
Erwinia carotovora
| SCRI1043
| Proteobacteria Gammaproteobacteria
| 5,064,019
| 4,492
| Unpublished
|
Erythrobacter litoralis
| HTCC2594
| Proteobacteria Alphaproteobacteria
| 3,052,398
| 3,011
| Unpublished
|
Escherichia coli
| 536
| Proteobacteria Gammaproteobacteria
| 4,938,920
| 4,685
| Unpublished
|
Escherichia coli
| CFT073
| Proteobacteria Gammaproteobacteria
| 5,231,428
| 5,379
| [77]
|
Escherichia coli
| K-12
| Proteobacteria Gammaproteobacteria
| 4,639,675
| 4,331
| [78]
|
Unspecified
| Unspecified
| Proteobacteria Gammaproteobacteria
| 4,646,332
| 4,337
| [79]
|
Escherichia coli
| O157:H7
| Proteobacteria Gammaproteobacteria
| 5,528,445
| 5,349
| [80]
|
Unspecified
| Unspecified
| Proteobacteria Gammaproteobacteria
| 5,498,450
| 5,361
| [81]
|
Escherichia coli
| UTI89
| Proteobacteria Gammaproteobacteria
| 5,065,741
| 5,066
| Unpublished
|
Francisella tularensis
| LVS
| Proteobacteria Gammaproteobacteria
| 1,895,994
| 1,967
| Unpublished
|
Francisella tularensis
| SCHUS4
| Proteobacteria Gammaproteobacteria
| 1,892,819
| 1,804
| [82]
|
Frankia species
| CcI3
| Acidobacteria
| 5,433,628
| 4,499
| Unpublished
|
Fusobacterium nucleatum
| ATCC25586
| Fusobacteria Fusobacteria
| 2,174,500
| 2,067
| [83]
|
Geobacillus kaustophilus
| HTA426
| Firmicutes Bacilli
| 3,544,776
| 3,498
| [84]
|
Geobacter metallireducens
| GS15
| Proteobacteria delta-epsilon
| 3,997,420
| 3,519
| Unpublished
|
Geobacter sulfurreducens
| PCA
| Proteobacteria delta-epsilon
| 3,814,139
| 3,447
| [85]
|
Gloeobacter violaceus
| PCC7421
| Cyanobacteria Gloeobacteria
| 4,659,019
| 4,430
| [86]
|
Gluconobacter oxydans
| 621H
| Proteobacteria Alphaproteobacteria
| 2,702,173
| 2,432
| [87]
|
Haemophilusducreyi
| 3500HP
| Proteobacteria Gammaproteobacteria
| 1,698,955
| 1,717
| Unpublished
|
Haemophilus influenzae
| 86-028NP
| Proteobacteria Gammaproteobacteria
| 1,913,428
| 1,792
| [88]
|
Haemophilus influenzae
| Rd
| Proteobacteria Gammaproteobacteria
| 1,830,138
| 1,709
| [89]
|
Hahella chejuensis
| KCTC2396
| Proteobacteria Gammaproteobacteria
| 7,215,267
| 6,782
| [90]
|
Helicobacter hepaticus
| ATCC51449
| Proteobacteria delta-epsilon
| 1,799,146
| 1,875
| [91]
|
Helicobacter pylori
| 26695
| Proteobacteria delta-epsilon
| 1,667,867
| 1,566
| [92]
|
Helicobacter pylori
| HPAG1
| Proteobacteria delta-epsilon
| 1,596,366
| 1,536
| Unpublished
|
Helicobacter pylori
| J99
| Proteobacteria delta-epsilon
| 1,643,831
| 1,491
| [93]
|
Idiomarina loihiensis
| L2TR
| Proteobacteria Gammaproteobacteria
| 2,839,318
| 2,628
| [94]
|
Jannaschia species
| CCS1
| Proteobacteria Alphaproteobacteria
| 4,317,977
| 4,212
| Unpublished
|
Lactobacillus acidophilus
| NCFM
| Firmicutes Bacilli
| 1,993,564
| 1,864
| [95]
|
Lactobacillus delbrueckii
| bulgaricus
| Firmicutes Bacilli
| 1,864,998
| 2,096
| Unpublished
|
Lactobacillus johnsonii
| NCC533
| Firmicutes Bacilli
| 1,992,676
| 1,821
| [96]
|
Lactobacillus plantarum
| WCFS1
| Firmicutes Bacilli
| 3,308,274
| 3,051
| [97]
|
Lactobacillus sakei
| 23K
| Firmicutes Bacilli
| 1,884,661
| 1,885
| Unpublished
|
Lactobacillus sakei
| sakei23K
| Firmicutes Bacilli
| 1,884,661
| 1,885
| Unpublished
|
Lactobacillus salivarius
| UCC118
| Firmicutes Bacilli
| 1,827,111
| 1,717
| Unpublished
|
Lactococcus lactis
| IL1403
| Firmicutes Bacilli
| 2,365,589
| 2,266
| [98]
|
Lawsonia intracellularis
| PHEMN1-00
| Proteobacteria delta-epsilon
| 27,048
| 29
| Unpublished
|
Unspecified
| Unspecified
| Proteobacteria delta-epsilon
| 39,794
| 24
| Unpublished
|
Unspecified
| Unspecified
| Proteobacteria delta-epsilon
| 194,553
| 104
| Unpublished
|
Unspecified
| Unspecified
| Proteobacteria delta-epsilon
| 1,457,619
| 1,187
| Unpublished
|
Legionella pneumophila
| Lens
| Proteobacteria Gammaproteobacteria
| 3,345,687
| 2,947
| [99]
|
Legionella pneumophila
| Paris
| Proteobacteria Gammaproteobacteria
| 3,503,610
| 3,082
| [100]
|
Legionella pneumophila
| Philadelphia1
| Proteobacteria Gammaproteobacteria
| 3,397,754
| 2,942
| Unpublished
|
Leifsonia xyli
| CTCB07
| Acidobacteria
| 2,584,158
| 2,030
| Unpublished
|
Leptospira interrogans
| 56601
| Spirochaetes
| 4,332,241
| 4,358
| [101]
|
Unspecified
| Unspecified
| Spirochaetes
| 358,943
| 367
| [102]
|
Leptospira interrogans
| FiocruzL1130
| Spirochaetes
| 4,277,185
| 3,394
| [103]
|
Unspecified
| Unspecified
| Spirochaetes
| 350,181
| 264
| [104]
|
Listeria innocua
| Clip11262
| Firmicutes Bacilli
| 3,011,208
| 2,981
| [105]
|
Listeria monocyto
| 4b
| Firmicutes Bacilli
| 2,905,187
| 2,821
| [106]
|
Listeria monocyto
| EGD
| Firmicutes Bacilli
| 2,944,528
| 2,855
| [107]
|
Magnetospirillum magneticum
| AMB1
| Proteobacteria Alphaproteobacteria
| 4,967,148
| 4,559
| [108]
|
Mannheimia succiniciproducens
| MBEL55E
| Proteobacteria Gammaproteobacteria
| 2,314,078
| 2,384
| Unpublished
|
Mesoplasma florum
| L1
| Firmicutes Mollicutes
| 793,224
| 683
| Unpublished
|
Mesorhizobium loti
| MAFF303099
| Proteobacteria Alphaproteobacteria
| 7,036,071
| 6,752
| [109]
|
Methylobacillus flagellatus
| KT
| Proteobacteria Betaproteobacteria
| 2,971,517
| 2,753
| Unpublished
|
Methylococcus capsulatus
| Bath
| Proteobacteria Gammaproteobacteria
| 3,304,561
| 2,960
| [110]
|
Moorella thermoacetica
| ATCC39073
| Firmicutes Clostridia
| 2,628,784
| 2,465
| Unpublished
|
Mycobacterium avium
| k10
| Acidobacteria
| 4,829,781
| 4,350
| [111]
|
Mycobacterium bovis
| AF212297
| Acidobacteria
| 4,345,492
| 3,953
| [112]
|
Mycobacterium leprae
| TN
| Acidobacteria
| 3,268,203
| 2,720
| [113]
|
Mycobacterium tuberculosis
| CDC1551
| Acidobacteria
| 4,403,837
| 4,189
| Unpublished
|
Mycobacterium tuberculosis
| H37Rv
| Acidobacteria
| 4,411,532
| 3,999
| [114]
|
Mycoplasma capricolum
| ATCC27343
| Firmicutes Mollicutes
| 1,010,023
| 812
| Unpublished
|
Mycoplasma gallisepticum
| R
| Firmicutes Mollicutes
| 996,422
| 726
| [115]
|
Mycoplasma genitalium
| G37
| Firmicutes Mollicutes
| 580,076
| 476
| [116]
|
Mycoplasma hyopneumoniae
| 232
| Firmicutes Mollicutes
| 892,758
| 691
| [117]
|
Mycoplasma hyopneumoniae
| 7448
| Firmicutes Mollicutes
| 920,079
| 663
| [118]
|
Mycoplasma hyopneumoniae
| J
| Firmicutes Mollicutes
| 897,405
| 665
| [119]
|
Mycoplasma mobile
| 163K
| Firmicutes Mollicutes
| 777,079
| 635
| [120]
|
Mycoplasma mycoides
| SC
| Firmicutes Mollicutes
| 1,211,703
| 1,016
| [121]
|
Mycoplasma penetrans
| HF2
| Firmicutes Mollicutes
| 1,358,633
| 1,037
| [122]
|
Mycoplasma pneumoniae
| M129
| Firmicutes Mollicutes
| 816,394
| 688
| [123]
|
Mycoplasma pulmonis
| UAB
| Firmicutes Mollicutes
| 963,879
| 782
| [124]
|
Mycoplasma synoviae
| 53
| Firmicutes Mollicutes
| 799,476
| 672
| [125]
|
Myxococcus xanthus
| DK1622
| Proteobacteria delta-epsilon
| 9,139,763
| 7,331
| Unpublished
|
Neisseria gonorrhoeae
| FA1090
| Proteobacteria Betaproteobacteria
| 2,153,922
| 2,002
| Unpublished
|
Neisseria meningitidis
| A
| Proteobacteria Betaproteobacteria
| 2,184,406
| 2,121
| [126]
|
Neisseria meningitidis
| B
| Proteobacteria Betaproteobacteria
| 2,272,360
| 2,063
| [127]
|
Neorickettsia sennetsu
| Miyayama
| Proteobacteria Alphaproteobacteria
| 859,006
| 932
| [128]
|
Nitrobacter hamburgensis
| X14
| Proteobacteria Alphaproteobacteria
| 4,406,967
| 3,804
| Unpublished
|
Nitrobacter winogradskyi
| Nb255
| Proteobacteria Alphaproteobacteria
| 3,402,093
| 3,122
| Unpublished
|
Nitrosococcus oceani
| ATCC19707
| Proteobacteria Gammaproteobacteria
| 3,481,691
| 2,976
| Unpublished
|
Nitrosomonas europaea
| Schmidt
| Proteobacteria Betaproteobacteria
| 2,812,094
| 2,574
| [129]
|
Nitrosospira multiformis
| ATCC25196
| Proteobacteria Betaproteobacteria
| 3,184,243
| 2,757
| Unpublished
|
Nocardia farcinica
| IFM10152
| Acidobacteria
| 6,021,225
| 5,683
| [130]
|
Novosphingobium aromaticivorans
| DSM12444
| Proteobacteria Alphaproteobacteria
| 3,561,584
| 3,324
| Unpublished
|
Oceanobacillus iheyensis
| HTE831
| Firmicutes Bacilli
| 3,630,528
| 3,496
| [131]
|
Parachlamy diaspecies
| UWE25
| Chlamydiae/Verrucomicrobia Chlamydiae
| 2,414,465
| 2,031
| [132]
|
Pasteurella multocida
| Pm70
| Proteobacteria Gammaproteobacteria
| 2,257,487
| 2,014
| [133]
|
Pelagibacter ubique
| HTCC1062
| Proteobacteria Alphaproteobacteria
| 1,308,759
| 1,354
| [134]
|
Pelobacter carbinolicus
| DSM2380
| Proteobacteria delta-epsilon
| 3,665,893
| 3,119
| Unpublished
|
Pelodictyon luteolum
| DSM273
| Bacteroidetes/Chlorobi Chlorobi
| 2,364,842
| 2,083
| Unpublished
|
Photobacterium profundum
| SS9
| Proteobacteria Gammaproteobacteria
| 4,085,304
| 3,416
| Unpublished
|
Unspecified
| Unspecified
| Proteobacteria Gammaproteobacteria
| 2,237,943
| 1,997
| Unpublished
|
Photorhabdus luminescens
| laumondiiTTO1
| Proteobacteria Gammaproteobacteria
| 5,688,987
| 4,905
| Unpublished
|
Phytoplas maasteris
| AYWB
| Firmicutes Mollicutes
| 706,569
| 671
| Unpublished
|
Phytoplas maasteris
| OY
| Firmicutes Mollicutes
| 860,631
| 754
| [135]
|
Polaromonas species
| JS666
| Proteobacteria Betaproteobacteria
| 5,200,264
| 4,817
| Unpublished
|
Porphyromonas gingivalis
| W83
| Bacteroidetes/Chlorobi Bacteroidetes
| 2,343,476
| 1,909
| [136]
|
Prochlorococcus marinus
| MED4
| Cyanobacteria Prochlorales
| 1,657,990
| 1,716
| [137]
|
Prochlorococcus marinus
| MIT9312
| Cyanobacteria Prochlorales
| 1,709,204
| 1,809
| Unpublished
|
Prochlorococcus marinus
| MIT9313
| Cyanobacteria Prochlorales
| 2,410,873
| 2,273
| [138]
|
Prochlorococcus marinus
| NATL2A
| Cyanobacteria Prochlorales
| 1,842,899
| 1,890
| Unpublished
|
Prochlorococcus marinus
| SS120
| Cyanobacteria Prochlorales
| 1,751,080
| 1,882
| [139]
|
Propionibacterium acnes
| KPA171202
| Acidobacteria
| 2,560,265
| 2,297
| Unpublished
|
Pseudoalteromonas haloplanktis
| TAC125
| Proteobacteria Gammaproteobacteria
| 3,214,944
| 2,941
| [140]
|
Unspecified
| Unspecified
| Proteobacteria Gammaproteobacteria
| 635,328
| 546
| [141]
|
Pseudomonas aeruginosa
| PAO1
| Proteobacteria Gammaproteobacteria
| 6,264,403
| 5,566
| [142]
|
Pseudomonas entomophila
| L48
| Proteobacteria Gammaproteobacteria
| 5,888,780
| 5,168
| Unpublished
|
Pseudomonas fluorescens
| Pf-5
| Proteobacteria Gammaproteobacteria
| 7,074,893
| 6,137
| [143]
|
Pseudomonas fluorescens
| PfO-1
| Proteobacteria Gammaproteobacteria
| 6,438,405
| 5,736
| Unpublished
|
Pseudomonas putida
| KT2440
| Proteobacteria Gammaproteobacteria
| 6,181,863
| 5,350
| [144]
|
Pseudomonas syringae
| B728a
| Proteobacteria Gammaproteobacteria
| 6,093,698
| 5,136
| [145]
|
Pseudomonas syringae
| DC3000
| Proteobacteria Gammaproteobacteria
| 6,397,126
| 5,470
| [146]
|
Pseudomonas syringae
| phaseolicola1448A
| Proteobacteria Gammaproteobacteria
| 5,928,787
| 4,983
| Unpublished
|
Psychrobacter arcticum
| 273-4
| Proteobacteria Gammaproteobacteria
| 2,650,701
| 2,147
| Unpublished
|
Psychrobacter cryohalolentis
| K5
| Proteobacteria Gammaproteobacteria
| 41,221
| 44
| Unpublished
|
Unspecified
| Unspecified
| Proteobacteria Gammaproteobacteria
| 3,059,876
| 2,467
| Unpublished
|
Ralstonia eutropha
| JMP134
| Proteobacteria Betaproteobacteria
| 3,806,533
| 3,439
| Unpublished
|
Unspecified
| Unspecified
| Proteobacteria Betaproteobacteria
| 2,726,152
| 2,407
| Unpublished
|
Ralstonia metallidurans
| CH34
| Proteobacteria Betaproteobacteria
| 3,928,089
| 3,601
| Unpublished
|
Unspecified
| Unspecified
| Proteobacteria Betaproteobacteria
| 2,580,084
| 2,313
| Unpublished
|
Ralstonia solanacearum
| GMI1000
| Proteobacteria Betaproteobacteria
| 3,716,413
| 3,441
| [147]
|
Unspecified
| Unspecified
| Proteobacteria Betaproteobacteria
| 2,094,509
| 1,679
| [148]
|
Rhizobium etli
| CFN42
| Proteobacteria Alphaproteobacteria
| 4,381,608
| 4,067
| [149]
|
Rhizobium leguminosarum
| viciae3841
| Proteobacteria Alphaproteobacteria
| 7,751,309
| 4,746
| Unpublished
|
Rhodobacter sphaeroides
| 2.4.1
| Proteobacteria Alphaproteobacteria
| 3,188,609
| 3,022
| Unpublished
|
Unspecified
| Unspecified
| Proteobacteria Alphaproteobacteria
| 943,016
| 835
| Unpublished
|
Rhodoferax ferrireducens
| DSM15236
| Proteobacteria Betaproteobacteria
| 4,712,337
| 4,170
| Unpublished
|
Rhodopirellula baltica
| strain1
| Planctomycetes Planctomycetacia
| 7,145,576
| 7,325
| Unpublished
|
Rhodopseudomonas palustris
| BisB18
| Proteobacteria Alphaproteobacteria
| 5,513,844
| 4,886
| Unpublished
|
Rhodopseudomonas palustris
| BisB5
| Proteobacteria Alphaproteobacteria
| 4,892,717
| 4,397
| Unpublished
|
Rhodopseudomonas palustris
| CGA009
| Proteobacteria Alphaproteobacteria
| 5,459,213
| 4,833
| [150]
|
Rhodopseudomonas palustris
| HaA2
| Proteobacteria Alphaproteobacteria
| 5,331,656
| 4,683
| Unpublished
|
Rhodospirillum rubrum
| ATCC11170
| Proteobacteria Alphaproteobacteria
| 4,352,825
| 3,791
| Unpublished
|
Rickettsia bellii
| RML369-C
| Proteobacteria Alphaproteobacteria
| 1,522,076
| 1,429
| Unpublished
|
Rickettsia conorii
| Malish7
| Proteobacteria Alphaproteobacteria
| 1,268,755
| 1,374
| [151]
|
Rickettsia felis
| URRWXCal2
| Proteobacteria Alphaproteobacteria
| 1,485,148
| 1,400
| [152]
|
Rickettsia prowazekii
| Madrid-E
| Proteobacteria Alphaproteobacteria
| 1,111,523
| 834
| [153]
|
Rickettsia typhi
| Wilmington
| Proteobacteria Alphaproteobacteria
| 1,111,496
| 838
| [154]
|
Rubrobacter xylanophilus
| DSM9941
| Acidobacteria
| 3,225,748
| 3,140
| Unpublished
|
Saccharophagus degradans
| Feb-40
| Proteobacteria Gammaproteobacteria
| 5,057,531
| 4,008
| Unpublished
|
Salinibacter ruber
| DSM13855
| Bacteroidetes/Chlorobi Bacteroidetes
| 3,551,823
| 2,801
| [155]
|
Salmonella enterica
| ATCC9150
| Proteobacteria Gammaproteobacteria
| 4,585,229
| 4,093
| [156]
|
Salmonella enterica
| SCB67
| Proteobacteria Gammaproteobacteria
| 4,755,700
| 4,445
| [157]
|
Salmonella enterica
| Ty2
| Proteobacteria Gammaproteobacteria
| 4,791,961
| 4,323
| [158]
|
Salmonella enterica
| typhiCT18
| Proteobacteria Gammaproteobacteria
| 4,809,037
| 4,600
| [159]
|
Salmonella typhimurium
| LT2
| Proteobacteria Gammaproteobacteria
| 4,857,432
| 4,452
| [160]
|
Shewanella denitrificans
| OS217
| Proteobacteria Gammaproteobacteria
| 4,545,906
| 3,754
| Unpublished
|
Shewanella oneidensis
| MR1
| Proteobacteria Gammaproteobacteria
| 4,969,803
| 4,630
| [161]
|
Shigella boydii
| Sb227
| Proteobacteria Gammaproteobacteria
| 4,519,823
| 4,142
| [162]
|
Shigella dysenteriae
| Sd197
| Proteobacteria Gammaproteobacteria
| 4,369,232
| 4,277
| [163]
|
Shigella flexneri
| 2457T
| Proteobacteria Gammaproteobacteria
| 4,599,354
| 4,073
| [164]
|
Shigella flexneri
| 2a301
| Proteobacteria Gammaproteobacteria
| 4,607,203
| 4,436
| [165]
|
Shigella sonnei
| Ss046
| Proteobacteria Gammaproteobacteria
| 4,825,265
| 4,224
| [166]
|
Silicibacter pomeroyi
| DSS3
| Proteobacteria Alphaproteobacteria
| 4,109,442
| 3,810
| [167]
|
Silicibacter species
| TM1040
| Proteobacteria Alphaproteobacteria
| 3,200,938
| 3,030
| Unpublished
|
Sinorhizobium meliloti
| 1021
| Proteobacteria Alphaproteobacteria
| 3,654,135
| 3,341
| [168]
|
Sodalis glossinidius
| morsitans
| Proteobacteria Gammaproteobacteria
| 4,171,146
| 2,432
| [169]
|
Sphingopyxis alaskensis
| RB2256
| Proteobacteria Alphaproteobacteria
| 3,345,170
| 3,165
| Unpublished
|
Staphylococcus aureus
| COL
| Firmicutes Bacilli
| 2,809,422
| 2,673
| [170]
|
Staphylococcus aureus
| MRSA252
| Firmicutes Bacilli
| 2,902,619
| 2,744
| [171]
|
Staphylococcus aureus
| MSSA476
| Firmicutes Bacilli
| 2,799,802
| 2,619
| [172]
|
Staphylococcus aureus
| Mu50
| Firmicutes Bacilli
| 2,878,529
| 2,699
| [173]
|
Staphylococcus aureus
| MW2
| Firmicutes Bacilli
| 2,820,462
| 2,632
| [174]
|
Staphylococcus aureus
| N315
| Firmicutes Bacilli
| 2,814,816
| 2,593
| [175]
|
Staphylococcus aureus
| NCTC8325
| Firmicutes Bacilli
| 2,821,361
| 2,892
| Unpublished
|
Staphylococcus aureus
| RF122
| Firmicutes Bacilli
| 2,742,531
| 2,589
| Unpublished
|
Staphylococcus aureus
| USA300
| Firmicutes Bacilli
| 2,872,769
| 2,560
| [176]
|
Staphylococcus epidermidis
| ATCC12228
| Firmicutes Bacilli
| 2,499,279
| 2,419
| Unpublished
|
Staphylococcusepidermidis
| RP62A
| Firmicutes Bacilli
| 2,616,530
| 2,494
| [177]
|
Staphylococcus haemolyticus
| JCSC1435
| Firmicutes Bacilli
| 2,685,015
| 2,678
| [178]
|
Staphylococcus saprophyticus
| saprophyticus
| Firmicutes Bacilli
| 2,516,575
| 2,446
| [179]
|
Streptococcus agalactiae
| A909
| Firmicutes Bacilli
| 2,127,839
| 1,996
| [180]
|
Streptococcus agalactiae
| NEM316
| Firmicutes Bacilli
| 2,211,485
| 2,134
| [181]
|
Streptococcus agalactiae
| V2603
| Firmicutes Bacilli
| 2,160,267
| 2,124
| [182]
|
Streptococcus mutans
| UAB159
| Firmicutes Bacilli
| 2,030,921
| 1,960
| [183]
|
Streptococcus pneumoniae
| R6
| Firmicutes Bacilli
| 2,038,615
| 2,043
| [184]
|
Streptococcus pneumoniae
| TIGR4
| Firmicutes Bacilli
| 2,160,842
| 2,125
| [185]
|
Streptococcus pyo
| M5Manfredo
| Firmicutes Bacilli
| 1,841,271
|
| Unpublished
|
Streptococcus pyo
| MGAS10270
| Firmicutes Bacilli
| 1,928,252
| 1,987
| [186]
|
Streptococcus pyo
| MGAS10394
| Firmicutes Bacilli
| 1,899,877
| 1,886
| [187]
|
Streptococcus pyo
| MGAS10750
| Firmicutes Bacilli
| 1,937,111
| 1,979
| [188]
|
Streptococcus pyo
| MGAS2096
| Firmicutes Bacilli
| 1,860,355
| 1,898
| [189]
|
Streptococcus pyo
| MGAS315
| Firmicutes Bacilli
| 1,900,521
| 1,865
| [190]
|
Streptococcus pyo
| MGAS5005
| Firmicutes Bacilli
| 1,838,554
| 1,865
| [191]
|
Streptococcus pyo
| MGAS6180
| Firmicutes Bacilli
| 1,897,573
| 1,894
| [192]
|
Streptococcus pyo
| MGAS8232
| Firmicutes Bacilli
| 1,895,017
| 1,845
| [193]
|
Streptococcus pyo
| MGAS9429
| Firmicutes Bacilli
| 1,836,467
| 1,877
| [194]
|
Streptococcus pyo
| SF370
| Firmicutes Bacilli
| 1,852,441
| 1,696
| [195]
|
Streptococcus pyo
| SSI1
| Firmicutes Bacilli
| 1,894,275
| 1,861
| [196]
|
Streptococcus thermophilus
| CNRZ1066
| Firmicutes Bacilli
| 1,796,226
| 1,915
| [197]
|
Streptococcus thermophilus
| LMG18311
| Firmicutes Bacilli
| 1,796,846
| 1,889
| [198]
|
Streptomyces avermitilis
| MA4680
| Acidobacteria
| 9,025,608
| 7,577
| [199]
|
Streptomyces coelicolor
| A3
| Acidobacteria
| 8,667,507
| 7,825
| [200]
|
Symbiobacterium thermophilum
| Strain
| Acidobacteria
| 3,566,135
| 3,337
| [201]
|
Synechococcus elongatus
| PCC6301
| Cyanobacteria Chroococcales
| 2,696,255
| 2,525
| Unpublished
|
Synechococcus elongatus
| PCC7942
| Cyanobacteria Chroococcales
| 2,695,903
| 2,611
| Unpublished
|
Synechococcus sp
| WH8102
| Cyanobacteria Chroococcales
| 2,434,428
| 2,526
| [202]
|
Synechococcus species
| CC9605
| Cyanobacteria Chroococcales
| 2,510,659
| 2,638
| Unpublished
|
Synechococcus species
| CC9902
| Cyanobacteria Chroococcales
| 2,234,828
| 2,304
| Unpublished
|
Synechocystis species
| PCC6803
| Cyanobacteria Chroococcales
| 3,573,470
| 3,167
| [203]
|
Syntrophus aciditrophicus
| SB
| Proteobacteria delta-epsilon
| 3,179,300
| 3,168
| Unpublished
|
Thermoanaerobacter tengcongensis
| MB4T
| Firmicutes Clostridia
| 2,689,445
| 2,588
| Unpublished
|
Thermobifida fusca
| YX
| Acidobacteria
| 3,642,249
| 3,110
| Unpublished
|
Thermosynechococcus elongatus
| bp1
| Cyanobacteria Chroococcales
| 2,593,857
| 2,475
| Unpublished
|
Thermotoga maritima
| MSB8
| Thermotogae
| 1,860,725
| 1,846
| [204]
|
Thermus thermophilus
| HB27
| Deinococcus-Thermus Deinococci
| 1,894,877
| 1,982
| [205]
|
Thermus thermophilus
| HB8
| Deinococcus-Thermus Deinococci
| 1,849,742
| 1,973
| Unpublished
|
Thiobacillus denitrificans
| ATCC25259
| Proteobacteria Betaproteobacteria
| 2,909,809
| 2,827
| Unpublished
|
Thiomicrospira crunogena
| XCL2
| Proteobacteria Gammaproteobacteria
| 2,427,734
| 2,192
| Unpublished
|
Thiomicrospira denitrificans
| ATCC33889
| Proteobacteria delta-epsilon
| 2,201,561
| 2,097
| Unpublished
|
Treponema denticola
| ATCC35405
| Spirochaetes
| 2,843,201
| 2,767
| [206]
|
Treponema pallidum
| Nichols
| Spirochaetes
| 1,138,011
| 1,031
| [207]
|
Tropheryma whippelii
| TW0827
| Acidobacteria
| 925,938
| 784
| Unpublished
|
Tropheryma whippelii
| Twist
| Acidobacteria
| 927,303
| 808
| [208]
|
Ureaplasma urealyticum
| serovar3
| Firmicutes Mollicutes
| 751,719
| 611
| [209]
|
Vibrio cholerae
| N16961
| Proteobacteria Gammaproteobacteria
| 2,961,149
| 2,736
| [210]
|
Unspecified
| Unspecified
| Proteobacteria Gammaproteobacteria
| 1,072,315
| 1,092
| [211]
|
Vibrio fischeri
| ES114
| Proteobacteria Gammaproteobacteria
| 2,906,179
| 2,575
| [212]
|
Unspecified
| Unspecified
| Proteobacteria Gammaproteobacteria
| 1,332,022
| 1,172
| [213]
|
Vibrio parahaemolyticus
| RIMD2210633
| Proteobacteria Gammaproteobacteria
| 3,288,558
| 3,080
| [214]
|
Unspecified
| Unspecified
| Proteobacteria Gammaproteobacteria
| 1,877,212
| 1,752
| [215]
|
Vibrio vulnificus
| CMCP6
| Proteobacteria Gammaproteobacteria
| 3,281,944
| 2,973
| [216]
|
Unspecified
| Unspecified
| Proteobacteria Gammaproteobacteria
| 1,844,853
| 1,565
| [217]
|
Vibriovulnificus
| YJ016
| Proteobacteria Gammaproteobacteria
| 3,354,505
| 3,262
| [218]
|
Unspecified
| Unspecified
| Proteobacteria Gammaproteobacteria
| 1,857,073
| 1,697
| [219]
|
Wigglesworthia glossinidia
| Strain
| Proteobacteria Gammaproteobacteria
| 697,724
| 611
| [220]
|
Wolbachiaendo symbiont
| TRS
| Proteobacteria Alphaproteobacteria
| 1,080,084
| 805
| [221]
|
Wolbachia pipientis
| wMel
| Proteobacteria Alphaproteobacteria
| 1,267,782
| 1,195
| [222]
|
Wolinella succino
| DSMZ1740
| Proteobacteria delta-epsilon
| 2,110,355
| 2,044
| [223]
|
Xanthomonas axonopodis
| citri306
| Proteobacteria Gammaproteobacteria
| 5,175,554
| 4,312
| [224]
|
Xanthomonas campestris
| 8004
| Proteobacteria Gammaproteobacteria
| 5,148,708
| 4,273
| [225]
|
Xanthomonas campestris
| 8510
| Proteobacteria Gammaproteobacteria
| 5,178,466
| 4,487
| [226]
|
Xanthomonas campestris
| ATCC33913
| Proteobacteria Gammaproteobacteria
| 5,076,188
| 4,181
| [227]
|
Xanthomonas oryzae
| KACC10331
| Proteobacteria Gammaproteobacteria
| 4,941,439
| 4,637
| [228]
|
Xanthomonas oryzae
| MAFF311018
| Proteobacteria Gammaproteobacteria
| 4,940,217
| 4,372
| Unpublished
|
Xylella fastidiosa
| 9a5c
| Proteobacteria Gammaproteobacteria
| 2,679,306
| 2,766
| [229]
|
Xylella fastidiosa
| Temecula1
| Proteobacteria Gammaproteobacteria
| 2,519,802
| 2,034
| [230]
|
Yersinia pestis
| Antiqua
| Proteobacteria Gammaproteobacteria
| 4,702,289
| 4,167
| [231]
|
Yersinia pestis
| CO-92BiovarOrientalis
| Proteobacteria Gammaproteobacteria
| 4,653,728
| 4,008
| [232]
|
Yersinia pestis
| KIM
| Proteobacteria Gammaproteobacteria
| 4,600,755
| 4,090
| [233]
|
Yersinia pestis
| Mediaevails
| Proteobacteria Gammaproteobacteria
| 4,595,065
| 3,895
| [234]
|
Yersinia pseudotuberculosis
| IP32953
| Proteobacteria Gammaproteobacteria
| 4,744,671
| 3,974
| [235]
|
Zymomonas mobilis
| ZM4
| Proteobacteria Alphaproteobacteria
| 2,056,416
| 1,998
| [236]
|
See also
References
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